Code Signing (Adding Digital Signatures) - Setup.exe (works) - myProgram.exe (fails)

Windows 10
SetupBuilder Developer Edition 2017
Version: 10.0.5710

Digital Signatures are added to Setup.exe, but NOT added to myProgram.exe

We are not getting any errors during the build (see log below)

----------------------------------------------------------
------ Build started: Project: setup.sb7, Configuration: Release Win32 ------
------ Date/Time: 02/22/2018 -- 11:33:36AM

------ SetupBuilder (tm) Project Script Compiler and Linker for Windows
------ Copyright (c) 1997-2017 Lindersoft
------ SetupScript (tm) Installation Script Language
------ Copyright (c) 2003-2017 Lindersoft
------ All rights reserved.

------ Developer Edition 2017 Version 10.0.5710
------ SetupBuilder (SB/EXE) Compiler Version 10.0.5710

Waiting for SKU Management configuration information...
Init Globals...
Set Media Type: Single-file image
Verify Code-Signed Install at Startup: DISABLED
OK
Writing Objects...
OK
Compiling...
setup.sb7
Init Standard Variables...
Performing pre-checks...
#pragma loaded: CODESIGN_SHA
#pragma CODESIGN_SHA = 12
#pragma loaded: CODESIGN_TSSHA1URL
SHA1 timestamp server defined
#pragma CODESIGN_TSSHA1URL = http://timestamp.comodoca.com/authenticode
OK
Timestamp server(s)...
SHA-1: http://timestamp.comodoca.com/authenticode
SHA-2: http://timestamp.globalsign.com/?signature=sha2
Type : 12
Script format version detected: 10.0.5452
Recursive compile (0:30): Common Definitions.sbi
#pragma loaded: MINVER
Finished
Continue (0:1:31):
C:\Clarion10\Apps\Version63\Acmswin\479\Update\Acm swin\withoutHelp\Payroll\setup.sb7
Embed Manifest (Preprocessor)...
Manifest embedded successfully [backup]:
C:\Clarion10\Apps\Version63\Acmswin\479\payroll.ex e
Adding Digital Certificate II (Preprocessor)...
SIGNTOOL: C:\Clarion10\Apps\Version63\Acmswin\479\payroll.ex e
SVER: 10.0.10240.16384
SHA1: 0
SHA2: 0
Code signed successfully: C:\Clarion10\Apps\Version63\Acmswin\479\payroll.ex e
Script(s) processed
Generating Code...
OK
Building executable...
Approx. Stub size: 24,235 bytes
Linking kernel...
Code size: 156,847 bytes
Generating and optimizing [1033] string resources [@2]...
Processing external file [1]: C:\Clarion5\APPS\AcmsWin\manual\License Agreement.rtf
OK
Linking [1033] language resource(s)...
Code size: 11,649 bytes
Linking dialog side bitmap...
Code size: 2,761 bytes
Linking dialog top bitmap...
Code size: 484 bytes
Including 2 core service file(s)...
Compressing file: C:\Program Files (x86)\Lindersoft\SetupBuilder 10
Developer\Images\sbInstall2.bmp
Code size: 25,171 bytes
Compressing file: C:\Program Files (x86)\Lindersoft\SetupBuilder 10
Developer\Images\sbInstall.bmp
Code size: 20,131 bytes
Linking Uninstall Script...
Code size: 288 bytes
Preparing Uninstaller Code-Signing...
OK
Calculating Feature and Type sizes...
OK
Resolving compiler variables...
OK
Analyzing installation script (protection mode)...
OK
Linking installation script...
Code size: 2,083 bytes
Linking loader...
PECVER: 4.0.4.0
Resum00 executed
Compile Version Resource...
Code size: 16,896 bytes
Add SZDD stamp @ 7692
Linking decompression library...
Code size: 9,387 bytes
Processing Uninstall Code-Signing...
Adding Digital Certificate to Uninstall...
Resolve CSI...
SIGNTOOL
SVER: 10.0.10240.16384
SHA1: 0
SHA2: 0
Successfully code signed Uninstall Object
Process File Overhead Extraction
OK
Generating Uninstall Delta [8000]...
34 byte-mods applied
Signature source added [12388:6426]
Signature patch added
OK
Finalizing application...
Adding Digital Certificate...
Resolve CSI...
SIGNTOOL:
C:\Clarion10\Apps\Version63\Acmswin\479\Update\Acm swin\withoutHelp\Payroll\Setup.exe
SVER: 10.0.10240.16384
SHA1: 0
SHA2: 0
Code signed successfully
Code Signing Certificate Expiration Date: 01/16/2021 - 1059 day(s)
Extended Information: T&S Consulting, LLC - 57 ce aa 58 a9 8b f9 af a6 81 ee
ad 27 30 b2 9a
Terminating CSigning Process...[0]
OK
Generating HTML report...
C:\Clarion10\Apps\Version63\Acmswin\479\Update\Acm swin\withoutHelp\Payroll\Setup.htm
OK
Generating CSV report...
C:\Clarion10\Apps\Version63\Acmswin\479\Update\Acm swin\withoutHelp\Payroll\Setup.csv
OK

--------------------------------------- Done ---------------------------------------

setup.sb7 - Setup.exe - 0 error(s), 0 warning(s), 1 file(s) code-signed

Total file(s) : 2
Total data size: 34,897,560 bytes (33.28 MB)
Total .exe size: 26,280,152 bytes (25.06 MB)

Location:
C:\Clarion10\Apps\Version63\Acmswin\479\Update\Acm swin\withoutHelp\Payroll\Setup.exe

Compilation Time: 8.53 sec.
Date/Time: 02/22/2018 -- 11:33:45AM

------------------------------- Compilation finished -------------------------------

Ken Stone